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OpenFPM
5.2.0
Project that contain the implementation of distributed structures
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OpenFPM
5.2.0
Project that contain the implementation of distributed structures
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Inheritance diagram for vector_dist_ws< dim, St, prop, Decomposition, Memory, layout_base >:Public Types | |
| typedef prop | value_type |
| typedef boost::mpl::int_< AggregateAppend< int, prop >::type::max_prop-1 > | flag_prop |
| Public Types inherited from vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > | |
| typedef vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > | self |
| Self type. | |
| typedef St | stype |
| typedef AggregateAppend< int, prop >::type | value_type |
| typedef CartDecomposition< dim, St > | Decomposition_type |
| typedef HeapMemory | Memory_type |
| typedef CellList< dim, St, Mem_fast<>, shift< dim, St >, internal_position_vector_type > | CellList_type |
| typedef int | yes_i_am_vector_dist |
| yes I am vector dist | |
| typedef std::integral_constant< bool, false > | is_it_a_subset |
| yes I am vector subset dist | |
Public Member Functions | |
| void | setSubset (size_t key, int sub_id) |
| int | getSubset (size_t key) |
| void | ghost_get_subset () |
| void | getLastSubset (int sub_id) |
| bool | write_frame (std::string out, size_t iteration, int opt=VTK_WRITER) |
| bool | write_frame (std::string out, size_t iteration, double time, int opt=VTK_WRITER) |
| bool | write (std::string out, int opt=VTK_WRITER) |
| Public Member Functions inherited from vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > | |
| vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > & | operator= (const vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > &v) |
| Operator= for distributed vector. More... | |
| vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > & | operator= (vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > &&v) |
| Operator= for distributed vector. More... | |
| vector_dist (const vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > &v) | |
| Copy Constructor. More... | |
| vector_dist (vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > &&v) noexcept | |
| Copy constructor. More... | |
| vector_dist (const CartDecomposition< dim, St > &dec, size_t np) | |
| Constructor with predefined decomposition. More... | |
| vector_dist (size_t np, Box< dim, St > box, const size_t(&bc)[dim], const Ghost< dim, St > &g, const grid_sm< dim, void > &gdist) | |
| Constructor of a distributed vector. More... | |
| vector_dist (size_t np, Box< dim, St > box, const size_t(&bc)[dim], const Ghost< dim, St > &g, size_t opt=0, const grid_sm< dim, void > &gdist=grid_sm< dim, void >()) | |
| Constructor of a distributed vector. More... | |
| void | setReferenceCounterToOne () |
| void | clear () |
| remove all the elements | |
| size_t | size_local () const |
| return the local size of the vector More... | |
| size_t | size_local_with_ghost () const |
| return the local size of the vector More... | |
| auto | getPos (vect_dist_key_dx vec_key) -> decltype(vPos.template get< 0 >(vec_key.getKey())) |
| Get the position of an element. More... | |
| auto | getPos (vect_dist_key_dx vec_key) const -> decltype(vPos.template get< 0 >(vec_key.getKey())) |
| Get the position of an element. More... | |
| auto | getPos (size_t vec_key) -> decltype(vPos.template get< 0 >(vec_key)) |
| Get the position of an element. More... | |
| auto | getPos (size_t vec_key) const -> decltype(vPos.template get< 0 >(vec_key)) |
| Get the position of an element. More... | |
| auto | getProp (vect_dist_key_dx vec_key) -> decltype(vPrp.template get< id >(vec_key.getKey())) |
| Get the property of an element. More... | |
| auto | getProp (vect_dist_key_dx vec_key) const -> decltype(vPrp.template get< id >(vec_key.getKey())) |
| Get the property of an element. More... | |
| auto | getProp (size_t vec_key) -> decltype(vPrp.template get< id >(vec_key)) |
| Get the property of an element. More... | |
| auto | getProp (size_t vec_key) const -> decltype(vPrp.template get< id >(vec_key)) |
| Get the property of an element. More... | |
| auto | getPosNC (vect_dist_key_dx vec_key) -> decltype(vPos.template get< 0 >(vec_key.getKey())) |
| Get the position of an element. More... | |
| auto | getPosNC (vect_dist_key_dx vec_key) const -> decltype(vPos.template get< 0 >(vec_key.getKey())) |
| Get the position of an element. More... | |
| auto | getPosNC (size_t vec_key) -> decltype(vPos.template get< 0 >(vec_key)) |
| Get the position of an element. More... | |
| auto | getPosNC (size_t vec_key) const -> decltype(vPos.template get< 0 >(vec_key)) |
| Get the position of an element. More... | |
| auto | getPropNC (vect_dist_key_dx vec_key) -> decltype(vPrp.template get< id >(vec_key.getKey())) |
| Get the property of an element. More... | |
| auto | getPropNC (vect_dist_key_dx vec_key) const -> decltype(vPrp.template get< id >(vec_key.getKey())) |
| Get the property of an element. More... | |
| auto | getPropNC (size_t vec_key) -> decltype(vPrp.template get< id >(vec_key)) |
| Get the property of an element. More... | |
| auto | getPropNC (size_t vec_key) const -> decltype(vPrp.template get< id >(vec_key)) |
| Get the property of an element. More... | |
| auto | getPosWrite (vect_dist_key_dx vec_key) -> decltype(vPos.template get< 0 >(vec_key.getKey())) |
| Get the position of an element. More... | |
| auto | getPosRead (vect_dist_key_dx vec_key) const -> decltype(vPos.template get< 0 >(vec_key.getKey())) |
| Get the position of an element. More... | |
| auto | getPropWrite (vect_dist_key_dx vec_key) -> decltype(vPrp.template get< id >(vec_key.getKey())) |
| Get the property of an element. More... | |
| auto | getPropRead (vect_dist_key_dx vec_key) const -> decltype(vPrp.template get< id >(vec_key.getKey())) |
| Get the property of an element. More... | |
| void | add () |
| Add local particle. More... | |
| void | appendLocal () |
| Add at the END of local and ghost particle. More... | |
| auto | getLastPos () -> decltype(vPos.template get< 0 >(0)) |
| Get the position of the last element. More... | |
| auto | getLastPosEnd () -> decltype(vPos.template get< 0 >(0)) |
| Get the position of the last element after ghost. More... | |
| auto | getLastProp () -> decltype(vPrp.template get< id >(0)) |
| Get the property of the last element. More... | |
| auto | getLastPosRead () -> decltype(vPos.template get< 0 >(0)) |
| Get the position of the last element. More... | |
| auto | getLastPropRead () -> decltype(vPrp.template get< id >(0)) |
| Get the property of the last element. More... | |
| auto | getLastPosWrite () -> decltype(vPos.template get< 0 >(0)) |
| Get the position of the last element. More... | |
| auto | getLastPropWrite () -> decltype(vPrp.template get< id >(0)) |
| Get the property of the last element. More... | |
| CellList_type | getCellListSym (St r_cut, size_t opt=CL_LINEAR_CELL_KEYS) |
| Construct a cell list symmetric based on a cut-off radius. More... | |
| CellL | getCellListSym (const size_t(&div)[dim], const size_t(&pad)[dim], size_t opt=CL_LINEAR_CELL_KEYS) |
| Construct a symmetric cell list based on a number of divisions and padding. More... | |
| CellList_type | getCellListSymLocal (St r_cut, size_t opt=CL_LINEAR_CELL_KEYS) |
| Construct a local symmetric cell list based on a cut-off radius. More... | |
| CellList_type | getCellList (St r_cut, size_t opt=CL_NON_SYMMETRIC|CL_LINEAR_CELL_KEYS, bool no_se3=false, float ghostEnlargeFactor=1.013) |
| Construct a cell list starting from the stored particles. More... | |
| CellL | getCellList_hilb (St r_cut, size_t opt=CL_NON_SYMMETRIC) |
| Construct an hilbert cell list starting from the stored particles. More... | |
| void | updateCellList (CellL &cellList, bool no_se3=false) |
| Update a cell list using the stored particles. More... | |
| VerletList_type | getVerletSym (St r_cut) |
| for each particle get the symmetric verlet list More... | |
| VerletList_type | getVerletCrs (St r_cut) |
| for each particle get the symmetric verlet list More... | |
| VerletList_type | getVerletAdaptRCut () |
| Get Verlet list with unique cut-off radius for every particle. More... | |
| VerletList_type | getVerlet (St r_cut, size_t neighborMaxNum=0) |
| for each particle get the verlet list More... | |
| void | updateVerlet (VerletList< dim, St, opt, Mem_type, shift< dim, St > > &verletList, St r_cut) |
| for each particle get the verlet list More... | |
| void | updateVerletAdaptRCut (VerletList< dim, St, opt, Mem_type, shift< dim, St > > &verletList) |
| Update non-symmetric adaptive r-cut Verlet list. More... | |
| void | reorder (int32_t m, reorder_opt opt=reorder_opt::HILBERT) |
| Construct a cell list starting from the stored particles and reorder a vector according to the Hilberts curve. More... | |
| void | reorder (int32_t m, const Ghost< dim, St > &enlarge, reorder_opt opt=reorder_opt::HILBERT) |
| Construct a cell list starting from the stored particles and reorder a vector according to the Hilberts curve. More... | |
| void | reorder_rcut (St r_cut) |
| Construct a cell list starting from the stored particles and reorder a vector according to the Hilberts curve. More... | |
| size_t | init_size_accum (size_t np) |
| It return the number of particles contained by the previous processors. More... | |
| vector_dist_iterator | getIterator () |
| Get an iterator that traverse domain and ghost particles. More... | |
| vector_dist_iterator | getIterator (size_t start, size_t stop) |
| Get an iterator that traverse domain and ghost particles. More... | |
| grid_dist_id_iterator_dec< CartDecomposition< dim, St > > | getGridIterator (const size_t(&sz)[dim]) |
| vector_dist_iterator | getGhostIterator () const |
| Get the iterator across the position of the ghost particles. More... | |
| vector_dist_iterator | getGhostIterator_no_se3 () const |
| Get the iterator across the position of the ghost particles. More... | |
| ParticleIt_Cells< dim, CellList > | getDomainIteratorCells (CellList &cellList) |
| Get an iterator that traverse the particles in the domain using a cell list. More... | |
| vector_dist_iterator | getDomainIterator () const |
| Get an iterator that traverse the particles in the domain. More... | |
| auto | getDomainIteratorDevice (size_t n_thr=default_kernel_wg_threads_) const -> decltype(this->getDomainIterator()) |
| Get an iterator that traverse the particles in the domain. More... | |
| vector_dist_iterator | getDomainIterator_no_se3 () const |
| Get an iterator that traverse the particles in the domain. More... | |
| vector_dist_iterator | getDomainAndGhostIterator () const |
| Get an iterator that traverse the particles in the domain. More... | |
| vector_dist_iterator | getDomainAndGhostIterator_no_se3 () const |
| Get an iterator that traverse the particles in the domain. More... | |
| CartDecomposition< dim, St > & | getDecomposition () |
| Get the decomposition. More... | |
| const CartDecomposition< dim, St > & | getDecomposition () const |
| Get the decomposition. More... | |
| void | map_list (size_t opt=NONE) |
| It move all the particles that does not belong to the local processor to the respective processor. More... | |
| void | map (size_t opt=NONE) |
| It move all the particles that does not belong to the local processor to the respective processor. More... | |
| void | ghost_get_subset () |
| Stub does not do anything. | |
| void | ghost_get (size_t opt=WITH_POSITION) |
| It synchronize the properties and position of the ghost particles. More... | |
| void | Ighost_get (size_t opt=WITH_POSITION) |
| It synchronize the properties and position of the ghost particles. More... | |
| void | ghost_wait (size_t opt=WITH_POSITION) |
| It synchronize the properties and position of the ghost particles. More... | |
| void | ghost_put (size_t opt_=NONE) |
| It synchronize the properties and position of the ghost particles. More... | |
| void | remove (std::set< size_t > &keys) |
| Remove a set of elements from the distributed vector. More... | |
| void | remove (openfpm::vector< size_t > &keys, size_t start=0) |
| Remove a set of elements from the distributed vector. More... | |
| void | remove (openfpm::vector< aggregate< int >> &keys, size_t start=0) |
| Remove a set of elements from the distributed vector. More... | |
| void | remove (size_t key) |
| Remove one element from the distributed vector. More... | |
| void | addComputationCosts (const self &vd, Model md=Model()) |
| Add the computation cost on the decomposition coming from the particles. More... | |
| void | addComputationCosts (Model md=Model(), size_t ts=1) |
| Add the computation cost on the decomposition coming from the particles. More... | |
| void | finalizeComputationCosts (Model md=Model(), size_t ts=1) |
| Add the computation cost on the decomposition coming from the particles. More... | |
| void | initializeComputationCosts () |
| Initialize the computational cost. | |
| void | save (const std::string &filename) const |
| Save the distributed vector on HDF5 file. More... | |
| void | load (const std::string &filename) |
| Load the distributed vector from an HDF5 file. More... | |
| void | setCapacity (unsigned int ns) |
| Reserve space for the internal vectors. More... | |
| bool | write (std::string out, int opt=VTK_WRITER) |
| Output particle position and properties. More... | |
| bool | write (std::string out, std::string meta_info, int opt=VTK_WRITER) |
| Output particle position and properties. More... | |
| void | deleteGhost () |
| Delete the particles on the ghost. | |
| void | resize (size_t rs) |
| Resize the vector (locally) More... | |
| void | discardLocalAppend (size_t rs) |
| Resize the vector at the end of the ghost (locally) More... | |
| bool | write_frame (std::string out, size_t iteration, int opt=VTK_WRITER) |
| Output particle position and properties. More... | |
| bool | write_frame (std::string out, size_t iteration, std::string meta_info, int opt=VTK_WRITER) |
| Output particle position and properties. More... | |
| bool | write_frame (std::string out, size_t iteration, double time, int opt=VTK_WRITER) |
| Output particle position and properties and add a time stamp to pvtp. More... | |
| void | getCellListParams (St r_cut, size_t(&div)[dim], Box< dim, St > &box, Ghost< dim, St > enlarge=Ghost< dim, St >(0.0)) |
| Get the Celllist parameters. More... | |
| Vcluster< HeapMemory > & | getVC () |
| Get the Virtual Cluster machine. More... | |
| const openfpm::vector< Point< dim, St >, HeapMemory,memory_traits_lin > & | getPosVector () const |
| return the position vector of all the particles More... | |
| openfpm::vector< Point< dim, St >, HeapMemory,memory_traits_lin > & | getPosVector () |
| return the position vector of all the particles More... | |
| const openfpm::vector< AggregateAppend< int, prop >::type,HeapMemory,memory_traits_lin > & | getPropVector () const |
| return the property vector of all the particles More... | |
| openfpm::vector< AggregateAppend< int, prop >::type,HeapMemory,memory_traits_lin > & | getPropVector () |
| return the property vector of all the particles More... | |
| size_t | accum () |
| It return the sum of the particles in the previous processors. More... | |
| ParticleItCRS_Cells< dim, cli, decltype(vPos)> | getParticleIteratorCRS_Cell (cli &cellList) |
| Get a special particle iterator able to iterate across particles using symmetric crossing scheme. More... | |
| void | setPropNames (const openfpm::vector< std::string > &names) |
| Set the properties names. More... | |
| openfpm::vector< std::string > & | getPropNames () |
| Get the properties names. More... | |
| openfpm::vector_key_iterator_seq< typename VerletList_type::Mem_type_type::local_index_type > | getParticleIteratorCRS (VerletList_type &cellList) |
| Get a special particle iterator able to iterate across particles using symmetric crossing scheme. More... | |
| grid_key_dx< dim > | getCRSStart (Celllist &cellList) |
| Return from which cell we have to start in case of CRS interation scheme. More... | |
| grid_key_dx< dim > | getCRSStop (Celllist &cellList) |
| Return from which cell we have to stop in case of CRS interation scheme. More... | |
| bool | isSubset () const |
| Indicate that this class is not a subset. More... | |
| void | deviceToHostProp () |
| Move the memory from the device to host memory. More... | |
| void | deviceToHostPos () |
| Move the memory from the device to host memory. More... | |
| void | hostToDeviceProp () |
| Move the memory from the device to host memory. More... | |
| void | hostToDevicePos () |
| Move the memory from the device to host memory. More... | |
| Public Member Functions inherited from vector_dist_comm< dim, St, prop, Decomposition, Memory, layout_base > | |
| vector_dist_comm (const vector_dist_comm< dim, St, prop, Decomposition, Memory, layout_base > &v) | |
| Copy Constructor. More... | |
| vector_dist_comm (const Decomposition &dec) | |
| Constructor. More... | |
| vector_dist_comm (Decomposition &&dec) | |
| Constructor. More... | |
| vector_dist_comm () | |
| Constructor. | |
| ~vector_dist_comm () | |
| Destructor. More... | |
| size_t | getDecompositionGranularity () |
| Get the number of minimum sub-domain per processor. More... | |
| void | setDecompositionGranularity (size_t n_sub) |
| Set the minimum number of sub-domain per processor. More... | |
| void | init_decomposition (Box< dim, St > &box, const size_t(&bc)[dim], const Ghost< dim, St > &g, size_t opt, const grid_sm< dim, void > &gdist) |
| Initialize the decomposition. More... | |
| void | init_decomposition_gr_cell (Box< dim, St > &box, const size_t(&bc)[dim], const Ghost< dim, St > &g, size_t opt, const grid_sm< dim, void > &gdist) |
| Initialize the decomposition. More... | |
| template<unsigned int impl, int ... prp> | |
| void | ghost_get_ (openfpm::vector< Point< dim, St >, Memory, layout_base > &v_pos, openfpm::vector< prop, Memory, layout_base > &v_prp, size_t &ghostMarker, size_t opt=WITH_POSITION) |
| It synchronize the properties and position of the ghost particles. More... | |
| template<int ... prp> | |
| void | ghost_wait_ (openfpm::vector< Point< dim, St >, Memory, layout_base > &v_pos, openfpm::vector< prop, Memory, layout_base > &v_prp, size_t &ghostMarker, size_t opt=WITH_POSITION) |
| It synchronize the properties and position of the ghost particles. More... | |
| template<unsigned int ... prp> | |
| void | map_list_ (openfpm::vector< Point< dim, St >> &v_pos, openfpm::vector< prop > &v_prp, size_t &ghostMarker, size_t opt) |
| It move all the particles that does not belong to the local processor to the respective processor. More... | |
| template<typename obp = KillParticle> | |
| void | map_ (openfpm::vector< Point< dim, St >, Memory, layout_base > &v_pos, openfpm::vector< prop, Memory, layout_base > &v_prp, size_t &ghostMarker, size_t opt) |
| It move all the particles that does not belong to the local processor to the respective processor. More... | |
| void | setDecomposition (Decomposition &dec2) |
| Set the decomposition. More... | |
| Decomposition & | getDecomposition () |
| Get the decomposition. More... | |
| const Decomposition & | getDecomposition () const |
| Get the decomposition. More... | |
| vector_dist_comm< dim, St, prop, Decomposition, Memory, layout_base > & | operator= (const vector_dist_comm< dim, St, prop, Decomposition, Memory, layout_base > &vc) |
| Copy a vector. More... | |
| vector_dist_comm< dim, St, prop, Decomposition, Memory, layout_base > & | operator= (vector_dist_comm< dim, St, prop, Decomposition, Memory, layout_base > &&vc) |
| Copy a vector. More... | |
| template<template< typename, typename > class op, int ... prp> | |
| void | ghost_put_ (openfpm::vector< Point< dim, St >, Memory, layout_base > &v_pos, openfpm::vector< prop, Memory, layout_base > &v_prp, size_t &ghostMarker, size_t opt) |
| Ghost put. More... | |
Additional Inherited Members | |
| Data Fields inherited from vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > | |
| decltype(vPos) typedef | internal_position_vector_type |
| Static Public Attributes inherited from vector_dist< dim, St, AggregateAppend< int, prop >::type, CartDecomposition< dim, St >, HeapMemory, memory_traits_lin > | |
| static const unsigned int | dims |
| template parameters typedefs | |
Definition at line 16 of file vector_dist_subset.hpp.
1.9.1 