vector_dist_multiphase_functions.hpp

/*
 * vector_dist_multiphase_functions.hpp
 *
 *  Created on: Oct 14, 2016
 *      Author: i-bird
 */
 
#ifndef SRC_VECTOR_VECTOR_DIST_MULTIPHASE_FUNCTIONS_HPP_
#define SRC_VECTOR_VECTOR_DIST_MULTIPHASE_FUNCTIONS_HPP_
 
#include "NN/CellList/CellListM.hpp"
#include "NN/VerletList/VerletListM.hpp"
 
template<typename Vector, typename CL, typename T>
VerletList<Vector::dims,typename Vector::stype,Mem_fast<>,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type,CL>
createVerlet(Vector & v, Vector & v1, CL & cl, T r_cut)
{
    VerletList<Vector::dims,typename Vector::stype,Mem_fast<>,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type,CL> ver;
 
    ver.Initialize(cl,r_cut,v.getPosVector(),v1.getPosVector(),v.size_local());
 
    return ver;
}
 
template<unsigned int sh_byte, typename Vector , typename Vector1,typename CL, typename T> VerletListM<Vector::dims,typename Vector::stype,sh_byte,CL,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type>
createVerletM(size_t pp, Vector & v, Vector1 & phases, CL & cl, T r_cut)
{
    VerletListM<Vector::dims,typename Vector::stype,sh_byte,CL,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type> ver;
 
    openfpm::vector<pos_v<typename Vector::internal_position_vector_type>> v_phases;
 
    for (size_t i = 0 ; i < phases.size() ; i++)
    {v_phases.add(pos_v<typename Vector::internal_position_vector_type>(phases.get(i).getPosVector()));}
 
    ver.Initialize(cl,pp,r_cut,v.getPosVector(),v_phases,v.size_local());
 
    return ver;
}
 
template<unsigned int nbit, typename Vector, typename T>
CellListM<Vector::dims,typename Vector::stype,nbit,typename Vector::CellList_type>
createCellListM(openfpm::vector<Vector> & phases, T r_cut)
{
    size_t div[3];
    Box<Vector::dims,typename Vector::stype> box_cl;
 
    CellListM<Vector::dims,typename Vector::stype,nbit,typename Vector::CellList_type> NN;
    if (phases.size() == 0)
        return NN;
 
    box_cl = phases.get(0).getDecomposition().getProcessorBounds();
    phases.get(0).getCellListParams(r_cut,div,box_cl);
 
    NN.Initialize(box_cl,div);
 
    // for all the phases i
    for (size_t i = 0; i < phases.size() ; i++)
    {
        // iterate across all the particle of the phase i
        auto it = phases.get(i).getDomainAndGhostIterator();
        while (it.isNext())
        {
            auto key = it.get();
 
            Point<Vector::dims,T> xp = phases.get(i).getPos(key);
 
            // Add the particle of the phase i to the cell list
            NN.add(xp, key.getKey(), i);
 
            ++it;
        }
    }
 
    return NN;
}
 
 
 
template<typename Vector,typename CL, typename T>
VerletList<Vector::dims,typename Vector::stype,Mem_fast<>,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type>
createVerletSym(Vector & v, Vector & v1, CL & cl, T r_cut)
{
    VerletList<Vector::dims,typename Vector::stype,Mem_fast<>,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type> ver;
 
    ver.Initialize(cl,r_cut,v.getPosVector(),v1.getPosVector(),v.size_local());
 
    return ver;
}
 
template<unsigned int sh_byte, typename Vector, typename Vector1 ,typename CL, typename T>
VerletListM<Vector::dims,typename Vector::stype,sh_byte,CL,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type>
createVerletSymM(size_t pp, Vector & v, Vector1 & phases, CL & cl, T r_cut)
{
    VerletListM<Vector::dims,typename Vector::stype,sh_byte,CL,shift<Vector::dims,typename Vector::stype>,typename Vector::internal_position_vector_type> ver;
 
    openfpm::vector<pos_v<typename CL::internal_vector_pos_type>> v_phases;
 
    for (size_t i = 0 ; i < phases.size() ; i++)
    {v_phases.add(pos_v<typename CL::internal_vector_pos_type>(phases.get(i).getPosVector()));}
 
    ver.Initialize(cl,pp,r_cut,v.getPosVector(),v_phases,v.size_local(),VL_SYMMETRIC);
 
    return ver;
}
 
template<unsigned int nbit, typename Vector, typename T>
CellListM<Vector::dims,typename Vector::stype,nbit,typename Vector::CellList_type>
createCellListSymM(openfpm::vector<Vector> & phases, T r_cut)
{
    Box<Vector::dims,typename Vector::stype> box_cl;
 
    CellListM<Vector::dims,typename Vector::stype,nbit,typename Vector::CellList_type> NN;
    if (phases.size() == 0)
    {return NN;}
 
    // Calculate the Cell list division for this CellList
    CellDecomposer_sm<Vector::dims,typename Vector::stype,shift<Vector::dims,typename Vector::stype>> cd_sm;
 
    size_t pad = 0;
    cl_param_calculateSym(phases.get(0).getDecomposition().getDomain(),cd_sm,phases.get(0).getDecomposition().getGhost(),r_cut,pad);
 
    // Processor bounding box
    Box<Vector::dims, typename Vector::stype> pbox = phases.get(0).getDecomposition().getProcessorBounds();
 
    // Ghost padding extension
    Ghost<Vector::dims,size_t> g_ext(0);
    NN.Initialize(cd_sm,pbox,pad);
 
    // for all the phases i
    for (size_t i = 0; i < phases.size() ; i++)
    {
        // iterate across all the particle of the phase i
        auto it = phases.get(i).getDomainAndGhostIterator();
        while (it.isNext())
        {
            auto key = it.get();
 
            Point<Vector::dims,T> xp = phases.get(i).getPos(key);
 
            // Add the particle of the phase i to the cell list
            NN.add(xp, key.getKey(), i);
 
            ++it;
        }
    }
 
    return NN;
}
 
#endif /* SRC_VECTOR_VECTOR_DIST_MULTIPHASE_FUNCTIONS_HPP_ */